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Strategies for protein purification

23 Jul 2025

Protein purification is performed in scales from micrograms and milligrams in research laboratories to kilograms and tonnes in industrial settings. In some laboratories, proteins are purified in parallel, using automated chromatography systems. The efficiency gained by the generic purification approaches based on affinity tagging of the target protein has revolutionized protein purification, and today many proteins can be purified very easily and efficiently.

However, some proteins may be very challenging to purify in an active and stable form, for example, integral membrane proteins, unstable protein complexes, proteins expressed as insoluble aggregates, and proteins with a specific set of post-translational modifications.

Explore different purification methods and learn how to select and combine chromatography methods and purification formats to monitor and evaluate protein purification.

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Size Exclusion ChromatographySize exclusion chromatography (SEC) is a liquid chromatographic technique used to separate and identify molecules based on their size, including polymers, proteins, nanoparticles & nucleic acid. SEC is further subdivided into gel filtration chromatography (GFC) and gel permeation chromatography (GPC) when an aqueous or organic mobile phase is used respectively. HPLC-based SEC systems and columns are available for analytical separation alongside SEC spin columns or filters to prep samples for many protocols. Find the best size exclusion chromatography equipment in our peer-reviewed product directory: compare products, check customer reviews and receive pricing direct from manufacturers.Protein PurificationProtein purification is a vital step in drug discovery, therapeutics, biotech and life science research. The purification process typically involves subcellular or membrane protein extraction with cell lysis kits, separation of proteins from cell debris by filtration or spin columns, and the isolation of proteins of interest from other proteins and impurities with affinity purification (including fusion protein tags and antibody binding proteins A, G and L), immunoprecipitation or chromatographic methods, such as ion exchange, size exclusion and immobilized metal affinity chromatography. All purification methods come in multiple formats for your laboratory needs, including agarose or magnetic beads, resins, columns and filter plates. Find the best protein purification equipment in our peer-reviewed product directory: compare products, check customer reviews and receive pricing direct from manufacturers.Biomolecules
Strategies for protein purification