A Streamlined Solution for the Construction of ChIP-Seq Libraries from Picogram Amounts of DNA

A Streamlined Solution for the Construction of ChIP-Seq Libraries from Picogram Amounts of DNA

24 Dec 2015

ChIP-Seq, chromatin immunoprecipitation followed by next-generation sequencing (NGS), is a valuable method enabling the study of DNA interactions with proteins, such as transcription factors and histone modifications. In ChIP-Seq workflows, proteins bound to DNA fragments of interest are enriched through formaldehyde crosslinking and targeted antibody selection, commonly known as immunoprecipitation. The enriched DNA is then purified and used as input into NGS library construction in preparation for sequencing. This application note demonstrates the use of the KAPA Hyper Prep Kit to offer a streamlined and effective solution for the construction of ChIP-Seq NGS libraries from ultra-low DNA inputs.

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DNA SequencingDNA sequencing, such as sanger sequencing, is a biological technique that determines the precise order of nucleotide bases in a fragment or template of DNA. DNA sequencers and genetic analyzers are based on capillary electrophoresis, where labeled DNA fragments are electrophoretically separated by size as they migrate through a polymer. Find the best DNA sequencing products, including DNA sequencing kits, genomic libraries and genetic identity kits in our peer-reviewed product directory: compare products, check customer reviews and receive pricing direct from manufacturers.Next Generation SequencingNext-generation sequencing (NGS), also known as whole-genome sequencing, high-throughput sequencing and massive parallel sequencing, produces and analyses thousands to millions of nucleotide sequences at once. Sequencing systems operate via varying technologies depending on the manufacturer, including sequencing by synthesis, ligation, pyrosequencing, ion semiconductor and single-molecule real-time sequencing. For NGS, library preparation is paramount to successful sequencing. In this section, explore a range of library preparation kits, from targeted, amplicon-based or hybridization-based kits including epigenomic, transcriptomic and genomic workflows to fragmentation kits. Find the best next-generation sequencing products in our peer-reviewed product directory: compare products, check customer reviews and receive pricing direct from manufacturers.PurificationPurification techniques are essential for isolating compounds of interest from complex mixtures, such as proteins, nucleic acids, and chemicals. These techniques are critical in biochemistry, drug development, and environmental studies. Explore purification systems in our peer-reviewed product directory; compare products, check reviews, and get pricing directly from manufacturers.Library GenerationLibrary generation refers to the construction of NGS libraries from RNA and DNA sources.DNA Fragment SizingImmunoprecipitationChromatinTranscriptomics