BHQ™ Probes
Dual-labelled probes featuring the original BHQ dye technologies

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Dual-Labeled BHQ Probes are traditional, linear, FRET probes incorporating a fluorophore and quencher covalently attached to the 5' and 3' ends of an oligo typically 20 to 30 bases in length. Fluorescence is released through the 5' exonuclease activity of Taq polymerase, which cleaves off the fluorescent dye upon the probe's hybridization to its complementary sequence.
Dual-Labeled BHQ Probes are ideal for detecting the presence and quantifying the amount of specific target sequences.
Top tips for robust qPCR results
Reproducibility issues are a common pain point experienced by scientists carrying out quantitative polymerase chain reaction (qPCR), or real-time PCR, with challenges being linked to suboptimal design, probe selection, or workflow execution. The inconsistencies impact not only data quality, but also wasted time, lost samples and delayed research milestones.
A successful qPCR experiment relies on a well‑designed workflow, from high‑quality sample preparation to optimized reagents, primers, and probes, supported by thoughtful assay design that avoids issues like nonspecific binding or inefficient amplification. Expert probe‑selection strategies enhance specificity, especially in multiplexing, while effective troubleshooting helps diagnose common problems such as poor efficiency, primer‑dimers, or high variability. By applying key optimization techniques, researchers can achieve sensitive, accurate, and reproducible qPCR results.
Download this SelectScience guide to explore:
- How to overcome challenges in qPCR assay design
- A guide to selecting the right qPCR probe
- The best way to troubleshoot your qPCR
- Tips for qPCR optimization and validation
Resource details:
- Document type: SelectScience guide
- Page count: 49
- Read time: 69 mins
- Edition: 1st
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7 innovative qPCR probe types explained
This comprehensive walkthrough animation outlines the latest developments in probe technologies in the qPCR field, highlighting the mechanisms of seven different real-time PCR probe and primer formats:
- Dual-labelled hydrolysis probes [00:19]
- BHQnova™ Probes [01:17]
- Minor groove binder (MGB) probes [01:49]
- Locked nucleic acid (LNA) probes [02:31]
- BHQplus™ Probes [03:15]
- Molecular Beacons [04:45]
- Scorpions™ Primers [06:00]
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