Scientists Reveal Recipe for the Perfect Balance of Breaks and Repairs in our Genome

Novel DNA repair enzyme gives insight into chemotherapy resistant tumors and neurodegenerative disorders

11 Jun 2018
Jenny Harbour
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New discovery gives insight into chemotherapy resistant cancers such as rhabdosarcoma – the most common soft tissue cancer in children. Findings could have significant implications in brain ageing which has an effect on memory and cognitive function.

Scientists at the University of Sheffield have discovered what keeps the perfect balance of breaks and repairs in our DNA – something which could help improve the success of chemotherapy and combat neurodegeneration associated with ageing. Our genome, where precious genetic information is stored, is challenged with thousands of breaks every day.

Cells possess an army of proteins that search for, detect and fix these breaks to maintain genome integrity, but little is known about how the cell fine-tunes the level of response in these repair factories to suit each and every repair event. The level of proteins in our cells is controlled by synthesis and degradation. Cells get rid of proteins when not needed by attaching a small peptide called ubiquitin.

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The new study, led by Dr Sherif El-Khamisy at the University of Sheffield’s Department of Molecular Biology and Biotechnology, has revealed an enzyme called UCHL3, which controls DNA repair by removing ubiquitin marks from TDP1 - a DNA repair protein. The findings also have implications in brain ageing which has an affect on memory, cognitive function and learning.

An overexpression of UCHL3 causes less ubiquitination of TDP1 and increases its protein level, which is found in chemotherapy resistant cancers such as rhabdosarcoma – the most common soft tissue sarcoma in children, which has a debilitating effect on the muscles, tendons and cartilage.

Too little UCHL3, however, was found to cause more ubiquitination of TDP1 reducing its level in neurological diseases such as ataxias - a group of disorders that affect co-ordination, balance and speech.

Dr El-Khamisy said: “This study identifies UCHL3 as a novel therapeutically druggable target where suppression of its activity can improve cancer treatment, whereas encouraging and fuelling its activity can combat neurodegeneration.

“Defective DNA repair is a common theme in a number of neurological disorders including motor neuron disease and dementia. Finding novel approaches to fuel the cell’s ability to repair genomic breaks may hold promise in improving treatment of a broad range of neurological diseases.”

The five-year study is funded by a Wellcome Trust Investigator Award to Dr El-Khamisy, and involved collaborations across departments at the University of Sheffield and internationally.

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Genome AnalysisGenomics, the study of genomes, includes functional genomics, evolutionary genomics and comparative genomics. There are many genomic technologies such as DNA sequencing of whole genomes, computational biology and bioinformatics. DNA and nucleic acids must be isolated and concentrated from cells for analysis with kits, automated analyzers and software. Other useful technologies for studying genomics include PCR, microarrays and electrophoresis.DNA SequencingDNA sequencing, such as sanger sequencing, is a biological technique that determines the precise order of nucleotide bases in a fragment or template of DNA. DNA sequencers and genetic analyzers are based on capillary electrophoresis, where labeled DNA fragments are electrophoretically separated by size as they migrate through a polymer. Find the best DNA sequencing products, including DNA sequencing kits, genomic libraries and genetic identity kits in our peer-reviewed product directory: compare products, check customer reviews and receive pricing direct from manufacturers.DNADeoxyribonucleic Acid (DNA) is the main component of chromosomes and the carrier of genetic information of living organisms. Find out here about PCR, NGS, ChIP-Seq, gel imaging, and many other techniques which can be used for the analysis of DNA.GenomicsGenomics is the study of genomes, focusing on the sequencing, analysis, and interpretation of genetic material. It is key in understanding genetic diseases, evolutionary biology, and personalized medicine. Techniques like next-generation sequencing (NGS) are commonly used in genomics research. Browse our peer-reviewed product directory to find the best genomics tools, compare products, check reviews, and get pricing directly from manufacturers.Cancer ResearchAlthough cancer is often referred to as a single condition, it actually consists of more than 100 different diseases. Microscopy, mass spectrometry, high throughput sequencing and flow cytometry are some of the most common techniques employed in cancer research labs.
Scientists Reveal Recipe for the Perfect Balance of Breaks and Repairs in our Genome