QIAGEN Introduces GeneReader NGS System

First truly end-to-end solution brings next-generation sequencing within reach for any lab

5 Nov 2015
Lois Manton-O'Byrne, PhD
Executive Editor

Product news

QIAGEN N.V. has announced the start of commercialization activities for its GeneReader NGS System, the first complete Sample to Insight next-generation sequencing (NGS) solution designed for any laboratory to deliver actionable results.

With the introduction of the GeneReader NGS System, QIAGEN is offering the world’s first truly end-to-end NGS workflow from primary sample to a final report that provides a simpler, more cost-effective way for clinical testing to take advantage of NGS technology and improve outcomes.

The first application for the GeneReader NGS System involves QIAGEN’s new Actionable Insights Tumor Panel, the first member of the family of GeneRead QIAact Panels powered by QCI®. This novel gene panel targets 12 clinically actionable genes that are often analyzed in most prevalent types of cancer, including breast, ovarian, colorectal, lung and melanoma. The panel can detect up to 1,250 different genetic mutations in a tumor sample. The most relevant variants – including those which are part of approved drug labels, reimbursement schemes, professional guidelines and active phase III clinical trials – have been identified and selected using the QIAGEN Knowledge Base, the industry’s largest collection of human-curated genomic findings and scientific literature.

QIAGEN will demonstrate this integrated Sample to Insight™ workflow at the Association for Molecular Pathology (AMP) 2015 Annual Meeting from November 4-7 in Austin, Texas, where commercialization of the GeneReader NGS System will be initiated. An analysis conducted by the Broad Institute of MIT and Harvard demonstrating the accuracy of the GeneReader NGS System through a head-to-head comparison with other molecular testing systems, including FDA-approved PCR assays and NGS systems, also will be presented at the AMP meeting. QIAGEN will also highlight its expanding range of therascreen companion diagnostics and leading liquid biopsy solutions at the conference.

“We designed the GeneReader NGS System with its integrated Sample to Insight workflow for clinical labs that see the potential of next-generation sequencing but urgently need a more user-friendly, cost-effective workflow for their use and research. GeneReader is the first fully integrated NGS workflow purpose-built to deliver actionable insights to improve outcomes,” said Peer M. Schatz, Chief Executive Officer of QIAGEN. “Our initial turnkey solution delivers a seamless NGS process with harmonized solutions from Sample to Insight. Because QIAGEN is the only company with a complete product suite across all relevant workflow steps, we can provide a unified solution that transforms each primary sample into a comprehensive and actionable report. Customers can partner with QIAGEN to unlock the power of NGS – from Sample to Insight.”

The GeneReader NGS System offers laboratories solutions for key challenges in next-generation sequencing:

  • The world’s first truly complete NGS workflow: Labs can rely on one partner to provide a seamlessly integrated workflow offering ease of use and efficiency from sample to insight.
  • Actionable insights: Customers can create relevant reports using QIAGEN’s proven gene panels and bioinformatics.
  • Flexibility to fit customer needs: Scalable batch sizes and continuous loading of multiple flow cells enable labs to adapt and scale the GeneReader NGS System to match their needs and grow.
  • Guaranteed results with predictable costs: Innovative commercial models such as price-per-insight options offer labs better cost management and low initial investment hurdles.
  • Proven expertise and service for our customers: QIAGEN supports customers in efficiently implementing, validating and operating the GeneReader NGS System in their labs.

QIAGEN’s Actionable Insights Tumor Panel, the core assay for the GeneReader NGS System, was built on extensive experience with the Company’s line of GeneRead™ DNAseq V2 panels, already in use in many NGS workflows to target a comprehensive range of cancer-related genes or regions. As shown in the analysis by the Broad Institute, results of the Actionable Insights Tumor Panel running on the GeneReader NGS System are concordant with other methods such as FDA-approved PCR assays and CE-IVD pyrosequencing assays that are used in many laboratories, as well as with other NGS sequencing platforms.

The GeneReader NGS System and the family of GeneRead QIAact Panels powered by QCI® integrate seamlessly with QIAGEN Clinical Insight (QCI™), the Company’s clinical decision support solution for labs. The system’s bioinformatics solution accesses the industry’s most comprehensive, up-to-date knowledge base to automate and streamline annotation, interpretation and reporting of results, including treatment options and annotations to the relevant literature. QCI, designed and validated in collaboration with clinical testing laboratories, overcomes a major challenge for labs by increasing the accuracy and speed of analyzing and interpreting NGS results.

QIAGEN also is developing a range of upgrades and enhancements that will add further value for labs that adopt the GeneReader NGS System. In the near term, QIAGEN plans to introduce additional cancer-related gene panels, broadening the coverage in oncology. QIAGEN also expects to expand the NGS content menu to indications beyond oncology. The platform also will evolve, as necessary, to address new applications and market segments, with current development programs targeting throughput expansion, increased output per flow cell, and an expanded range of sample types, including non-invasive liquid biopsies. QIAGEN bioinformatics solutions are continuously updated, including updates of the Knowledge Base.

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ImmunologyImmunological techniques measure and characterize immune responses. Immunology kits and analysis systems often use techniques such as ELISA, radioimmunoassay (RIA) and immunodiffusion assays, Immunohistochemistry, and flow cytometry. Immunologists use equipment such as flow Cytometers, plate readers, plate washers and fluorescent microscopes.Clinical ChemistryBiochemistry (or clinical chemistry) involves the analysis of bodily fluids using chemical tests. Techniques used include HPLC, chromatography, spectroscopy, mass spectrometry, immunochemical, electrophoresis, turbidometric / spectrophotometric assay, MRI and ISE analysis. Tests are often carried out on plasma or serum but urine (urinalysis) and fecal specimens are also processed.Clinical GeneticsMolecular Genetics covers the analysis of hereditary genetic disease and chromosomal abnormalities. Genetics can be analysed using DNA, RNA, and protein microarrays, PCR, RT PCR and DNA sequencing. Genetic equipment includes genetic workstations, thermal cyclers, cooling blocks and electrophoresis products. Diagnostic kits are used for DNA / RNA extraction and purification.Chem / BioinformaticsCheminformatics and bioinformatics are computational techniques used in chemistry and biology, respectively, for data acquisition, processing and storage. Cheminformatics focuses on compound information, whereas bioinformatics is mainly applied to analysis and modeling of genomics, genetic and sequencing information. Hardware and software is available for data acquisition, analysis, management and storage.Next Generation SequencingNext-generation sequencing (NGS), also known as whole-genome sequencing, high-throughput sequencing and massive parallel sequencing, produces and analyses thousands to millions of nucleotide sequences at once. Sequencing systems operate via varying technologies depending on the manufacturer, including sequencing by synthesis, ligation, pyrosequencing, ion semiconductor and single-molecule real-time sequencing. For NGS, library preparation is paramount to successful sequencing. In this section, explore a range of library preparation kits, from targeted, amplicon-based or hybridization-based kits including epigenomic, transcriptomic and genomic workflows to fragmentation kits. Find the best next-generation sequencing products in our peer-reviewed product directory: compare products, check customer reviews and receive pricing direct from manufacturers.Cancer DiagnosticsThere are a wide variety of diagnostic tests for cancer available, and this range continues to expand as our knowledge of cancer improves. Current diagnostic methods include biopsy, imaging and blood tests for known biomarkers. New methods in research development include liquid biopsies and cancer breathalyzers.NGS SoftwareClinical ChemistryClinical chemistry involves the analysis of bodily fluids, like blood and urine, to diagnose and monitor diseases. Tests in clinical chemistry provide critical information for patient care and treatment decisions. Explore clinical chemistry tools in our peer-reviewed product directory; compare products, check reviews, and get pricing directly from manufacturers.TumorsTumor research focuses on understanding abnormal cell growth that leads to cancer. Identifying biomarkers, studying tumor microenvironments, and developing targeted therapies are critical for advancing cancer treatment. Early detection and personalized treatment options are key to improving outcomes for patients. Browse our peer-reviewed product directory to explore tools for tumor research, diagnostics, and cancer therapies; compare products, read customer reviews, and get pricing directly from manufacturers.Liquid BiopsiesLiquid biopsies are non-invasive tests used to detect cancer and other diseases by analyzing blood or other bodily fluids. This technique is gaining popularity for early detection, monitoring treatment response, and detecting minimal residual disease. Explore liquid biopsy solutions in our peer-reviewed product directory; compare products, check reviews, and get pricing directly from manufacturers.
QIAGEN Introduces GeneReader NGS System