QIAGEN Integrates Quality Control Tools into GeneReader NGS System

Reference data set from Horizon affirms proven accuracy of GeneReader workflow

31 May 2016
Weylan Kiam-Laine
Microbiologist

Product news

QIAGEN N.V. today announced that an extensive package consisting of a quality control set and verification data will be offered with its GeneReader NGS System, reinforcing the proven accuracy of its next-generation sequencing (NGS) workflow and facilitating system setup, quality assurance and training for laboratories. QIAGEN has incorporated the Horizon Discovery Group’s industry-standard reference control data set into the GeneReader NGS workflow to support clinical cancer research users from Sample to Insight.

In addition, QIAGEN’s GeneRead QIAact Actionable Insights Tumor Panel, the first in a family of multiplex panels for the GeneReader NGS System, has demonstrated the highest levels of accuracy, consistency and reliability in extensive testing compared with Horizon’s control data. The workflow achieved full concordance with the Horizon Quantitative Multiplex FFPE Reference Standards in correctly identifying eight critical cancer-linked variants above 5% allelic frequency covered by the control data. The QIAact panel targets 12 clinically actionable genes often analyzed in the most prevalent types of cancer research, including breast, ovarian, colorectal, lung and melanoma.

“We created the GeneReader NGS System to provide the world’s first truly complete solution for next-generation sequencing, everything a research laboratory needs to achieve actionable insights, and now QIAGEN is the only company to offer quality control for complete NGS workflows. Labs can effectively manage NGS with one vendor from Sample to Insight, rather than juggling the complexity of many providers,” said Jonathan Arnold, QIAGEN’s Oncology Franchise Business Leader. “Integrating Horizon controls into the GeneReader NGS System workflow makes quality assurance easier for users, from system set-up and training laboratory staff to guiding workflow quality control. QIAGEN scientists have proven our Actionable Insights Tumor Panel as robust and reliable based on Horizon data, confirming earlier findings by the respected Broad Institute.”

Dr. Yassmine Akkari, Molecular Pathology Technical Director for Legacy Health in Portland, Oregon, said: “As a laboratory director, my responsibility is to deliver accurate results in a timely manner. Reference standards and protocols are critical to labs like mine to establish confidence in a testing platform, and to use in important training and QC processes. This dataset published by QIAGEN is the first of its kind for NGS, and the comparison of the Actionable Insights Tumor Panel to Horizon’s industry benchmarks affirms the accuracy and reliability of the GeneReader NGS system.”

“We are pleased that QIAGEN has chosen Horizon as a partner”, said Dr. Paul Morrill, President, Products Business, Horizon Discovery Group. “The incorporation of our widely-used and well-established reference standards as a data set into the GeneReader NGS workflow demonstrates the quality of the system and underlines the critical role our reference samples play in the adoption of NGS workflows by clinical research laboratories.”

The GeneReader NGS System, introduced in late 2015, is gaining rapidly worldwide adoption as a highly efficient solution to address fragmented NGS workflows and bottlenecks that have hindered many research labs from achieving actionable insights from next-generation sequencing. QIAGEN is developing a range of enhancements that will add further value, including upcoming gene panels with additional content focusing on breast and lung cancer.

QIAGEN will demonstrate the GeneReader NGS System together with its other Sample to Insights solutions for molecular diagnostic and research applications in oncology at Booth 18031 at the American Society of Clinical Oncology (ASCO) 2016 Annual Meeting on June 3-7, 2016, in Chicago.

Links

Tags

Genome AnalysisGenomics, the study of genomes, includes functional genomics, evolutionary genomics and comparative genomics. There are many genomic technologies such as DNA sequencing of whole genomes, computational biology and bioinformatics. DNA and nucleic acids must be isolated and concentrated from cells for analysis with kits, automated analyzers and software. Other useful technologies for studying genomics include PCR, microarrays and electrophoresis.ImmunologyImmunological techniques measure and characterize immune responses. Immunology kits and analysis systems often use techniques such as ELISA, radioimmunoassay (RIA) and immunodiffusion assays, Immunohistochemistry, and flow cytometry. Immunologists use equipment such as flow Cytometers, plate readers, plate washers and fluorescent microscopes.DNA SequencingDNA sequencing, such as sanger sequencing, is a biological technique that determines the precise order of nucleotide bases in a fragment or template of DNA. DNA sequencers and genetic analyzers are based on capillary electrophoresis, where labeled DNA fragments are electrophoretically separated by size as they migrate through a polymer. Find the best DNA sequencing products, including DNA sequencing kits, genomic libraries and genetic identity kits in our peer-reviewed product directory: compare products, check customer reviews and receive pricing direct from manufacturers.Gene Expression and Molecular CloningMolecular cloning is a set of techniques that utilizes vectors to transfer recombinant DNA into host cells and is an essential tool for investigating the expression of genes and proteins in bacterial or mammalian cells. A variety of vectors optimized for gene cloning and expression in a range of host organisms are available, alongside competent cells for genetic replication. Here, you can explore a range of molecular tools, high-quality genomic and cDNA libraries, premade clones, transformation and transfection reagents and mutagenesis or gene expression detection assays and expression arrays. Find the best gene expression and molecular cloning products in our peer-reviewed product directory: compare products, check customer reviews and receive pricing direct from manufacturers.Clinical GeneticsMolecular Genetics covers the analysis of hereditary genetic disease and chromosomal abnormalities. Genetics can be analysed using DNA, RNA, and protein microarrays, PCR, RT PCR and DNA sequencing. Genetic equipment includes genetic workstations, thermal cyclers, cooling blocks and electrophoresis products. Diagnostic kits are used for DNA / RNA extraction and purification.Next Generation SequencingNext-generation sequencing (NGS), also known as whole-genome sequencing, high-throughput sequencing and massive parallel sequencing, produces and analyses thousands to millions of nucleotide sequences at once. Sequencing systems operate via varying technologies depending on the manufacturer, including sequencing by synthesis, ligation, pyrosequencing, ion semiconductor and single-molecule real-time sequencing. For NGS, library preparation is paramount to successful sequencing. In this section, explore a range of library preparation kits, from targeted, amplicon-based or hybridization-based kits including epigenomic, transcriptomic and genomic workflows to fragmentation kits. Find the best next-generation sequencing products in our peer-reviewed product directory: compare products, check customer reviews and receive pricing direct from manufacturers.Colorectal CancerImmunologyImmunology is the branch of medical science that covers the study of all aspects of the immune system of multicellular organisms.Quality ControlQuality control is needed in all production processes. Quality control is a monitoring procedure or set of procedures that are put in place to ensure that a manufactured product adheres to a defined set of quality criteria. Ovarian CancerGene ExpressionLung CancerLung cancer is a leading cause of cancer-related deaths worldwide, often diagnosed at an advanced stage. Research focuses on early detection, targeted therapies, and personalized treatment strategies. Explore lung cancer research and diagnostic products in our peer-reviewed product directory; compare products, check reviews, and get pricing directly from manufacturers.Cancer ResearchCancer research aims to understand the mechanisms of cancer development and progression to improve prevention, diagnosis, and treatment. From molecular biology to clinical trials, research spans a wide range of disciplines, including immunotherapy, targeted therapies, and drug discovery. Explore the best cancer research products in our peer-reviewed product directory; compare products, check reviews, and get pricing directly from manufacturers.Gene EditingGene editing is the precise alteration to an organism's DNA, with CRISPR being the most well-known technique. It is used in a wide range of applications, including the development of disease models and gene therapy, and crop improvement. Browse our peer-reviewed product directory to find the best gene editing solutions, compare products, check reviews, and get pricing directly from manufacturers.Clinical Genetics
QIAGEN Integrates Quality Control Tools into GeneReader NGS System