NIH TAKES TO ACUMEN EXPLORER - TTP LabTech allows NIH to match high content with high throughput

8 Feb 2006

Product news

The National Institutes of Health (NIH) Chemical Genomics Center (NCGC) has announced data showing the effectiveness of TTP LabTech’s Acumen Explorer™ for high content screening at high throughput. This exciting development was carried out as part of the NCGC’s unique quantitative HTS (qHTS) programme.

The NCGC is at the cutting edge of small molecule screening, running 50-70% of assays in a cellular format. The work involves extensive screening of the genome and data produced can be accessed by the entire research community via a public database (http://pubchem.ncbi.nlm.nih.gov), so reliability of results is paramount. The NCGC’s qHTS programme assays multiple concentrations of each compound and generates hundreds of thousands of concentration-effect relationships from primary screening. Consequently, there is a significant increase in wells screened over traditional single point testing, to a magnitude of 7- to 15-fold. Therefore, a truly high throughput automated system for screening 1536 well plates was essential.

The NCGC has integrated TTP LabTech’s Acumen Explorer laser-scanning cytometer into its major screening system from Kalypsys, Inc. Here it will be used for population distribution analysis of cells in microplates, initially providing reporter gene analysis.

The Acumen Explorer is a laser scanning rather than image acquisition system. Subsequent analysis means that data files are tiny – essential in such a high throughput system. Laser scanning and a wide field of view makes the Acumen Explorer capable of generating 300,000 data points in 24 hours working in a 1536 well format.

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Genome AnalysisGenomics, the study of genomes, includes functional genomics, evolutionary genomics and comparative genomics. There are many genomic technologies such as DNA sequencing of whole genomes, computational biology and bioinformatics. DNA and nucleic acids must be isolated and concentrated from cells for analysis with kits, automated analyzers and software. Other useful technologies for studying genomics include PCR, microarrays and electrophoresis.High-Content ScreeningHigh-content screening (HCS), also known as high-content analysis (HCA), is a high-throughput technique used in drug discovery to identify substances that alter the phenotype of cells. HCS uses fluorescent microscopic imaging and automated image analysis to investigate cellular events such as apoptosis, cell viability, GPCR activation, oxide production, neurite outgrowth, and cell signaling. Find the best fluorescent labeling reagents, cellular assays, and high-content imaging systems in our peer-reviewed product directory: compare products, check customer reviews and receive pricing direct from manufacturers.
NIH TAKES TO ACUMEN EXPLORER - TTP LabTech allows NIH to match high content with high throughput