New Software Platform Offers Powerful Next Generation Sequencing Capabilities

24 Jan 2017
Mia Harley
Biochemist

Industry news

Omicia, Inc., a provider of clinical genomic data analysis and reporting software, announced that it has acquired Seattle-based Spiral Genetics. Spiral’s advanced tools add multiple variant detection capabilities for next-generation sequencing (NGS) to Omicia’s software platform.

Spiral’s graph-based technology enables accurate detection of structural variants and provides population-scale data-mining capabilities for clinical laboratories, life science companies and country sequencing programs. Also included in the acquisition are Spiral’s population-specific reference genome and lossless data compression technologies. As a result, Omicia and its customers will have new opportunities to develop novel diagnostics and efficiently manage long-term genomic data storage.

“We’re excited to combine our team and technology with Omicia. Access to Omicia’s diverse customer base, global market position and market-leading platform will help us define the future of healthcare,” said Adina Mangubat, CEO of Spiral Genetics. “Omicia and Spiral have come together to create the most advanced, end-to-end bioinformatics solution in healthcare.”

Omicia now offers a secure, powerful range of NGS analysis capabilities to support high- throughput panels, exomes and whole genomes for identification of hereditary diseases and somatic cancer, delivering clinical reports straight into electronic medical record (EMR) workflows. Omicia’s technology has been used by more than 1,000 research institutions and clinical labs, including population sequencing initiatives (e.g. Genomics England), health systems and hospitals (e.g. University of Pittsburgh Medical Center and Rady Children’s Hospital - San Diego) and national reference laboratories (e.g. LabCorp).

“The strategic integration of Spiral’s technologies effectively cements Omicia’s leadership position in precision medicine. By removing the need to access multiple software platforms, quality, accuracy and turnaround time are improved and major roadblocks to clinical adoption are removed,” said Matt Tindall, CEO of Omicia. “Spiral brings a world-class team of commercial leaders, computer scientists and computational biologists with deep expertise in large-scale genome analysis and algorithm development, as well as proven technology and customers.”

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Data AnalysisData analysis hardware and software is available to make data processing straight-forward yet powerful. Data software can be used for math and stats, technical graphing and image analysis. In addition, software is available for specific data analysis of electrophoresis, densitometry, ELISA and DNA sequencing.Clinical GeneticsMolecular Genetics covers the analysis of hereditary genetic disease and chromosomal abnormalities. Genetics can be analysed using DNA, RNA, and protein microarrays, PCR, RT PCR and DNA sequencing. Genetic equipment includes genetic workstations, thermal cyclers, cooling blocks and electrophoresis products. Diagnostic kits are used for DNA / RNA extraction and purification.Next Generation SequencingNext-generation sequencing (NGS), also known as whole-genome sequencing, high-throughput sequencing and massive parallel sequencing, produces and analyses thousands to millions of nucleotide sequences at once. Sequencing systems operate via varying technologies depending on the manufacturer, including sequencing by synthesis, ligation, pyrosequencing, ion semiconductor and single-molecule real-time sequencing. For NGS, library preparation is paramount to successful sequencing. In this section, explore a range of library preparation kits, from targeted, amplicon-based or hybridization-based kits including epigenomic, transcriptomic and genomic workflows to fragmentation kits. Find the best next-generation sequencing products in our peer-reviewed product directory: compare products, check customer reviews and receive pricing direct from manufacturers.Software PlatformsSoftware platforms are useful for various stages of laboratory experiments from data collection to data storage and processing. For instance lab software is available for system control, data management, data analysis and qualification / validation.NGS SoftwareNGSClinical GeneticsSoftware SolutionPrecision MedicinePrecision medicine refers to the idea of customized healthcare, where medical decisions and treatments are tailored to the individual patient. Molecular diagnostics, companion diagnostics and Next Generation Sequencing (NGS) play a pivotal role in this approach.
New Software Platform Offers Powerful Next Generation Sequencing Capabilities