Molecular Research and Spanish Drug Discovery

Dr Emilio Diez-Monedero explains the current approach to molecular drug discovery and gives SelectScience a sneak peek into the SLAS Spanish Drug Discovery Network Meeting

24 Sept 2015
Lois Manton-O'Byrne, PhD
Executive Editor

Editorial article

Dr Emilio Diez-Monedero, Vice President and Director of the Molecular Discovery Research (MDR) Centre in Madrid, Spain SLAS SLAS is a global community of more than 18,000 scientists—from academia, government and industry—collectively focused on leveraging the power of technology to achieve scientific objectives and aim to unite great minds in science and technology for the advancement of all research.

Emilio Diez-Monedero, Ph.D., is Vice President and Director of the Molecular Discovery Research (MDR) Center for GlaxoSmithKline (GSK) in Tres Cantos, Madrid, Spain. The centre specializes in the use of biochemical and cell-based assay for high throughput screening. It is a state-of-the-art facility with regard to automation, miniaturization and detection systems for in vitro pharmacological studies. The most relevant disciplines include compound management (over two million compounds on site), assay development, cell culture pilot plan, high throughput screening, data analysis, hit qualification and computational chemistry.

The group provides HTS and other early discovery functions (e.g. compound mechanism of action studies, in vitro safety profiling, complex screening data analysis algorithms, etc) in all therapeutic areas to GSK R&D, as well as to external organizations and academic groups in Europe, Asia, and North America via collaboration agreements.

Dr. Emilio Diez-Monedero is also the SLAS Europe Council Chair and is currently participating in the organisation of the SLAS VII Spanish Drug Discovery Network Meeting. His history in the Society goes back over 20 years, having served the Society in different roles including one term in the Board of Directors of the former SBS, and several years as member of the JBS Editorial Board.

What are the industry's current approaches to molecular drug discovery?

Every project in drug discovery is different and it all depends on what knowledge exists in the specific area of unmet medical need. As an industry, we struggle with the attrition rate in the overall process that starts with the inception of a new therapeutic hypothesis and finishes with the approval of a new medicine.

In molecular discovery, at the beginning of this very long journey, the industry is making very important investments in technologies that should help to improve the way we select molecular targets. We are trying to better understand the information on genetics, genomics, proteomics, etc and how it all relates to different pathologies, with the hope that this will result in higher success rates.

Similar to this example for target selection, there are other areas of science where better understanding of in vitro and preclinical data will help to better select the molecules that we progress forward. That includes better selection of small molecules, better assays to predict efficacy and safety in humans, etc.

What are the current challenges and opportunities?

As I previously mentioned, the challenges are many, but for me it all boils down to the lack of understanding and low predictability of preclinical in vitro and in vivo assays and models, and our inability to use all the information available for making the right decisions. Fortunately, scientific breakthroughs in recent years allow us to better understand fundamental aspects of biology, and how this could be use for the design of better assays and models for drug discovery. In this regard, the impact of other technologies such as material science and nano-fluidics, just as an example, are having a very important role on these developments.

Which techniques/technologies are enabling this science?

I believe that recent advances of in vitro manipulation of primary and stem cells, together with new gene editing technologies are going to revolutionize the way we carry out research in early drug discovery. In addition, with the developments on new materials, nano-fluidics, nano-photonics, and cellular technologies, we will be able to better reproduce and monitor cellular events in complex multi-cellular 3D cell cultures and organoids. Altogether we will have access to a much more predictable drug discovery process.

What is the upcoming SLAS Spanish Drug Discovery Network Meeting?

The Spanish Drug Discovery Network (SSDN) will be housing the VII meeting edition in Barcelona (November 12-13). What started seven years ago as a meeting of a few Spanish scientists and technologists from academia and industry with common interest in drug discovery has become a larger event with strong international participations. SDDN and SLAS agreed last year that this event has become core in the activities of SLAS in Europe, and SLAS has taken the responsibility to organize the event from now on.

The meeting will still maintain the local flavor, but it has certainly an aspiration to be a consolidated European forum for scientific and technological discussion on early drug discovery disciplines. The program for this year's edition will include a number of presentations and round tables that will address some of the hottest topics in the field. There will also be opportunity to present posters and we are expecting a good presence of our industrial partners, which provides technical solutions, reagents, and many more of the tools that we use in our drug discovery activities. I am looking forward to being there and interacting with as many of my colleagues as possible and enjoying the atmosphere and dynamisms of the city of Barcelona.

The Society for Laboratory Automation and Screening (SLAS), in collaboration with the Spanish Drug Discovery Network (SDDN), presents VII Spanish Drug Discovery Network Meeting, November 12-13, 2015 in Barcelona, Spain. Registration is now open here.

Register today to expand your knowledge and advance your career! Join more than academics and industry professionals to discuss the latest advancements in cutting-edge technologies for drug discovery.

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AntibodiesAntibodies are used in techniques such as confocal and fluorescence microscopy, flow cytometry, ELISA, ELISPOT, immunohistochemistry, western blotting and immunopreciptation. Select specific antigen reactivity, high specific affinity, low non-specific binding, monoclonal or polyclonal, primary or secondary antibodies and associated conjugates such as an enzyme or dye for visualization.Genome AnalysisGenomics, the study of genomes, includes functional genomics, evolutionary genomics and comparative genomics. There are many genomic technologies such as DNA sequencing of whole genomes, computational biology and bioinformatics. DNA and nucleic acids must be isolated and concentrated from cells for analysis with kits, automated analyzers and software. Other useful technologies for studying genomics include PCR, microarrays and electrophoresis.ProteomicsProteomics is the systemic bioinformatics study of proteins and amino acids, including their structure, size, function and identification. Tools used in proteomics include chromatography, blotting and gels, protein arrays, mass spectrometry and ELISA and associated analysis software. Analyzers and proteomic systems should be sensitive, high resolution, fast and may be automated for high-throughput.High-Throughput ScreeningHigh-throughput screening (HTS) is an automated drug discovery technique for identification of active compounds against a compound library. Use HTS readers and integrated assay preparation / analysis workstations to screen your compounds. Identify active compounds against various HTS libraries, including membranes, proteins and peptides and HTS cell lines. Find the best high-throughput screening products in our peer-reviewed product directory: compare products, check customer reviews and receive pricing direct from manufacturers.Data AnalysisData analysis hardware and software is available to make data processing straight-forward yet powerful. Data software can be used for math and stats, technical graphing and image analysis. In addition, software is available for specific data analysis of electrophoresis, densitometry, ELISA and DNA sequencing.ImmunologyImmunological techniques measure and characterize immune responses. Immunology kits and analysis systems often use techniques such as ELISA, radioimmunoassay (RIA) and immunodiffusion assays, Immunohistochemistry, and flow cytometry. Immunologists use equipment such as flow Cytometers, plate readers, plate washers and fluorescent microscopes.Cell-Based AssaysCell-based assays are used to monitor the presence, quantity and activities of a desired cellular analyte including drug molecules or biomarkers. This can reveal information on cell health (apoptosis, cytotoxicity, viability and proliferation assays), cell metabolism, cell migration and cell signaling mechanisms. Find the best cell-based assay products, kits and equipment with our peer reviewed product directory: compare products, check customer reviews and receiving pricing direct from manufacturers.High-Content ScreeningHigh-content screening (HCS), also known as high-content analysis (HCA), is a high-throughput technique used in drug discovery to identify substances that alter the phenotype of cells. HCS uses fluorescent microscopic imaging and automated image analysis to investigate cellular events such as apoptosis, cell viability, GPCR activation, oxide production, neurite outgrowth, and cell signaling. Find the best fluorescent labeling reagents, cellular assays, and high-content imaging systems in our peer-reviewed product directory: compare products, check customer reviews and receive pricing direct from manufacturers.DNA SequencingDNA sequencing, such as sanger sequencing, is a biological technique that determines the precise order of nucleotide bases in a fragment or template of DNA. DNA sequencers and genetic analyzers are based on capillary electrophoresis, where labeled DNA fragments are electrophoretically separated by size as they migrate through a polymer. Find the best DNA sequencing products, including DNA sequencing kits, genomic libraries and genetic identity kits in our peer-reviewed product directory: compare products, check customer reviews and receive pricing direct from manufacturers.Protein PurificationProtein purification is a vital step in drug discovery, therapeutics, biotech and life science research. The purification process typically involves subcellular or membrane protein extraction with cell lysis kits, separation of proteins from cell debris by filtration or spin columns, and the isolation of proteins of interest from other proteins and impurities with affinity purification (including fusion protein tags and antibody binding proteins A, G and L), immunoprecipitation or chromatographic methods, such as ion exchange, size exclusion and immobilized metal affinity chromatography. All purification methods come in multiple formats for your laboratory needs, including agarose or magnetic beads, resins, columns and filter plates. Find the best protein purification equipment in our peer-reviewed product directory: compare products, check customer reviews and receive pricing direct from manufacturers.Gene Expression and Molecular CloningMolecular cloning is a set of techniques that utilizes vectors to transfer recombinant DNA into host cells and is an essential tool for investigating the expression of genes and proteins in bacterial or mammalian cells. A variety of vectors optimized for gene cloning and expression in a range of host organisms are available, alongside competent cells for genetic replication. Here, you can explore a range of molecular tools, high-quality genomic and cDNA libraries, premade clones, transformation and transfection reagents and mutagenesis or gene expression detection assays and expression arrays. Find the best gene expression and molecular cloning products in our peer-reviewed product directory: compare products, check customer reviews and receive pricing direct from manufacturers.BiomarkersBiomarkers are biological markers which can be measured and evaluated to indicate a biological state. The use of biomarkers in research and diagnosis can indicate a normal or disease state or drug response of cells / tissues. Biomarkers include genetic markers, cell surface markers such as antigens, antibodies or receptors and secreted molecules such as cytokines. An assay system is required for identification of biomarkers. :Clinical TrialsClinical Trials, an essential part of drug discovery process, assess the safety and effectiveness of a new medication or device in the pharmaceutical industry. Clinical Trials are a phased process (Phase 0, Phase I, Phase II, Phase III and Phase IV) which begins after initial preclinical testing.Clinical ChemistryBiochemistry (or clinical chemistry) involves the analysis of bodily fluids using chemical tests. Techniques used include HPLC, chromatography, spectroscopy, mass spectrometry, immunochemical, electrophoresis, turbidometric / spectrophotometric assay, MRI and ISE analysis. Tests are often carried out on plasma or serum but urine (urinalysis) and fecal specimens are also processed.Clinical GeneticsMolecular Genetics covers the analysis of hereditary genetic disease and chromosomal abnormalities. Genetics can be analysed using DNA, RNA, and protein microarrays, PCR, RT PCR and DNA sequencing. Genetic equipment includes genetic workstations, thermal cyclers, cooling blocks and electrophoresis products. Diagnostic kits are used for DNA / RNA extraction and purification.