Leading European Research Institutions Select RainDance’s ThunderStorm™ System for High-Throughput Targeted Sequencing

8 Nov 2012

Product news

RainDance Technologies, Inc., the Digital Biology™ Company, today announced new placements of its ThunderStorm™ System at the LIGAN-Personalized Medicine Equipment of Excellence at the Pasteur Institute of Lille in France and CEINGE Biotecnologie Avanzate in Naples, Italy. The ThunderStorm System is a fully automated high-throughput targeted sequencing solution that enables researchers to determine all variation contained in any region of the genome faster and easier than ever before.

Leveraging RainDance’s proven single-molecule picodroplet PCR technology, the ThunderStorm System supports a wide range of sequencing applications, including candidate gene screening, deep sequencing of heterogeneous tumor samples and medical genetics testing.

At the LIGAN-Personalized Medicine Equipment of Excellence at the Pasteur Institute of Lille, researchers are focused on the development of cost-effective, high-throughput and high-quality approaches for the molecular diagnosis of genetic diseases such as monogenic forms of diabetes and obesity. Their vision is to develop solutions that are cheaper and faster than whole exome sequencing and less labor intensive than traditional Sanger sequencing while maintaining levels of sensitivity as good, or better, than this gold-standard DNA sequencing method. In addition to their own research, LIGAN will also offer services for target enrichment using the ThunderStorm System.

Professor Philippe Froguel, head of Equipex LIGAN said, "Physicians need more cost effective and quicker methods of gene screening that enable highly reliable diagnosis of genetic disorders. These conditions would benefit from the broad dissemination of genetic testing and these solutions will further support the development of genomic medicine and its promise of more personalized treatments for human diseases. The RainDance ThunderStorm System is a big step towards this direction.”

At CEINGE, researchers will use the ThunderStorm System to design panels for researching and discovering novel mutations and genes related to the onset and/or development of specific tumors or inherited human diseases. In particular, CEINGE researchers will focus on groups of multigenic diseases such as cardiomyopathies, retinal diseases and cancer hotspots.

Professor Francesco Salvatore, President and Scientific Coordinator of CEINGE said, “Today’s advanced sequencing technologies have provided an unprecedented opportunity to obtain a new understanding of disease pathogenesis that we can use to increase the sensitivity of molecular tests and better identify the mutation carriers. The ThunderStorm System provides us with an important technology to perform our sequencing experiments in larger patient populations using a high-throughput system with the capacity to enrich larger numbers of samples for use in downstream next-generation sequencing applications.

The possibility to obtain high accuracy in mutation detection and a diagnostic sensitivity comparable or even higher than conventional sequencing, allows us to approach regulatory approvals very soon in different countries, such as those with CLIA environments. These activities will also be offered as service.”

“The ThunderStorm System delivers unprecedented daily sample throughput, automated walk-away operation and running economics that are significantly lower than any other commercial solution,” added Mark Dronsfield, Head of European Commercial Operations for RainDance Technologies. “The ThunderStorm System provides customers like LIGAN and CEINGE with a production-ready platform for clinical research and a validation solution for their next-generation sequencing workflows.”

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Genome AnalysisGenomics, the study of genomes, includes functional genomics, evolutionary genomics and comparative genomics. There are many genomic technologies such as DNA sequencing of whole genomes, computational biology and bioinformatics. DNA and nucleic acids must be isolated and concentrated from cells for analysis with kits, automated analyzers and software. Other useful technologies for studying genomics include PCR, microarrays and electrophoresis.PCR and Thermal CyclingPolymerase chain reaction (PCR) kits and thermal cyclers are used for the in vitro amplification of DNA permitting subsequent analysis and experimental procedures. Explore a range of high-quality polymerase, primers and nucleotides or simplify your workflow with a PCR mastermix. Find reverse transcription PCR (RT-PCR) and cDNA synthesis kits for RNA products and libraries. Quantitatively measure the amplification of DNA with real-time PCR (qPCR) and droplet digital PCR (ddPCR) kits and systems, and discover automated PCR setup solutions to increase throughput. Alternative DNA amplification methods also include recombinase polymerase amplification (RPA) kits. Find the best PCR kits and thermal cyclers and purification equipment in our peer-reviewed product directory: compare products, check customer reviews and receive pricing direct from manufacturers.DNA SequencingDNA sequencing, such as sanger sequencing, is a biological technique that determines the precise order of nucleotide bases in a fragment or template of DNA. DNA sequencers and genetic analyzers are based on capillary electrophoresis, where labeled DNA fragments are electrophoretically separated by size as they migrate through a polymer. Find the best DNA sequencing products, including DNA sequencing kits, genomic libraries and genetic identity kits in our peer-reviewed product directory: compare products, check customer reviews and receive pricing direct from manufacturers.Next Generation SequencingNext-generation sequencing (NGS), also known as whole-genome sequencing, high-throughput sequencing and massive parallel sequencing, produces and analyses thousands to millions of nucleotide sequences at once. Sequencing systems operate via varying technologies depending on the manufacturer, including sequencing by synthesis, ligation, pyrosequencing, ion semiconductor and single-molecule real-time sequencing. For NGS, library preparation is paramount to successful sequencing. In this section, explore a range of library preparation kits, from targeted, amplicon-based or hybridization-based kits including epigenomic, transcriptomic and genomic workflows to fragmentation kits. Find the best next-generation sequencing products in our peer-reviewed product directory: compare products, check customer reviews and receive pricing direct from manufacturers.Clinical GeneticsMolecular Genetics covers the analysis of hereditary genetic disease and chromosomal abnormalities. Genetics can be analysed using DNA, RNA, and protein microarrays, PCR, RT PCR and DNA sequencing. Genetic equipment includes genetic workstations, thermal cyclers, cooling blocks and electrophoresis products. Diagnostic kits are used for DNA / RNA extraction and purification.Precision MedicinePrecision medicine refers to the idea of customized healthcare, where medical decisions and treatments are tailored to the individual patient. Molecular diagnostics, companion diagnostics and Next Generation Sequencing (NGS) play a pivotal role in this approach. High ThroughputHigh throughput experiments allow the simultaneous processing of several samples. This parallelization reduces the cost per experiment and increases reproducibility and output volume of data.miRNASequencingSequencing refers to determining the order of nucleotides in a DNA or RNA molecule. This process is essential in genomics, diagnostics, and evolutionary biology. Techniques like next-generation sequencing (NGS) and Sanger sequencing provide high-throughput and precise data for analyzing genomes and transcriptomes. Browse our peer-reviewed product directory to find the best sequencing tools and reagents, compare products, check reviews, and get pricing directly from manufacturers.