GATC Biotech announces collaboration agreement to develop comprehensive DNA-based sepsis diagnostic

23 Sept 2007

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GATC Biotech, Europe’s leading DNA sequencing service provider, announced today that it has entered into a collaboration agreement with the Fraunhofer Institute in Germany, and the National University of Pusan and biotech company Gene In Corporation, Ltd, both in South Korea. GATC Biotech is the Coordinating Partner of the collaboration, which aims to develop a comprehensive DNA microarray-based diagnostic test able to detect both bacterial and fungal sepsis-triggering pathogens. The project is partially funded by the Federal Ministry of Education, Science, Research and Technology in Germany.

Infectious diseases, after cardiovascular diseases, are the most frequent cause of deaths in the world (WHO, 1999). Approximately 18 million cases of sepsis occur world-wide per year. The mortality rate for sepsis is 28-50%, and the associated costs are estimated at €7.6 billion. Quick and precise diagnosis of sepsis is crucial to the success of a course of a therapy. Current diagnostic processes rely on time-consuming cultivation of pathogenic microbes. The DNA microarray-based diagnostic under development will enable the immediate detection of organism-specific nucleic acid sequences, offering the advantage of reducing the time between sample collection and diagnosis, leading to a reduction in mortality rates.

The project is one of several that connect GATC Biotech’s DNA analysis expertise with demanding medical conditions. Additional projects that GATC Biotech is contributing to include CONSERT (Concerted Safety and Efficiency Evaluation of Retroviral Transgenesis for Gene Therapy of Inherited Diseases), XENOME (detection of retroviral elements in the porcine genome), and EURESFUN (integrated post-genomic approaches for the understanding, detection and prevention of antifungal drug resistance in fungal pathogens). The Company collaborates with the Fraunhofer Institute on EURESFUN, and also partnered with the Institute on the successfully completed project IDENTIGENE (development and validation of new suitable technologies for gene expression studies to identify functional candidate genes without the use of specific DNA probes).

Peter Pohl, CEO of GATC Biotech, commented: “We are delighted to be taking part in this collaboration. With nearly two decades of experience in genetic analysis, GATC Biotech is ideally positioned to contribute to research projects relating to human health. The clinical diagnostics field is still dominated by classic microbial procedures, involving the time-consuming cultivation of pathogenic germs. The successful development of a DNA-based diagnostic will reduce the time between sample collection and diagnosis, and will represent a huge step towards increasing survival rates for patients.”

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Genome AnalysisGenomics, the study of genomes, includes functional genomics, evolutionary genomics and comparative genomics. There are many genomic technologies such as DNA sequencing of whole genomes, computational biology and bioinformatics. DNA and nucleic acids must be isolated and concentrated from cells for analysis with kits, automated analyzers and software. Other useful technologies for studying genomics include PCR, microarrays and electrophoresis.Microarray AnalysisMicroarrays, also known as biochips, are used for the detection and analysis of multiple genes, proteins, antibodies, or biomarkers on a single microchip. This can reveal information on protein or gene expression, single nucleotide polymorphism (SNP), copy number variation (CNV), epigenetics and patient health in clinical diagnostic tests. Discover a range of microarray scanners and prefabricated antibody, protein, RNA and DNA microarrays for your analysis or consider creating your own custom microarrays with a microarray printer. Find the best microarray products in our peer-reviewed product directory: compare products, check customer reviews and receive pricing direct from manufacturers.Point-of-CarePoint-of-Care Testing (POCT) or Near Patient Testing (NPT) products are available for urine, blood and other clinical chemistry analyses. POCT includes: blood glucose testing, blood gas and electrolytes analysis, rapid coagulation testing (PT / INR), rapid cardiac markers diagnostics, drugs of abuse screening, urine strips testing, pregnancy testing, fecal occult blood analysis, food pathogens screening, hemoglobin diagnostics, infectious disease testing and cholesterol screening.DNA SequencingDNA sequencing, such as sanger sequencing, is a biological technique that determines the precise order of nucleotide bases in a fragment or template of DNA. DNA sequencers and genetic analyzers are based on capillary electrophoresis, where labeled DNA fragments are electrophoretically separated by size as they migrate through a polymer. Find the best DNA sequencing products, including DNA sequencing kits, genomic libraries and genetic identity kits in our peer-reviewed product directory: compare products, check customer reviews and receive pricing direct from manufacturers.
GATC Biotech announces collaboration agreement to develop comprehensive DNA-based sepsis diagnostic