Alithea Genomics introduces extraction-free, RNA-seq for 3D drug screening and toxicology

The MERCURIUS™ Spheroid DRUG-seq is a novel, extraction-free RNA sequencing library preparation kit built for 3D spheroid models

10 Oct 2025

Product news

Alithea Genomics has launched its MERCURIUS™ Spheroid DRUG-seq, a novel, extraction-free RNA sequencing library preparation kit built for 3D spheroid models. This advancement extends Alithea’s MERCURIUS DRUG-seq technology into physiologically relevant 3D systems, bringing simplicity, sensitivity, and throughput to drug screening in more in vivo–like cellular environments.

With MERCURIUS™ Spheroid DRUG-seq, researchers can bypass conventional RNA extraction and pre-amplification, enabling direct processing of spheroids in an optimized lysis buffer. The streamlined, one-day workflow delivers full transcriptome coverage in a massively multiplexed manner, making the method ideal for large-scale mechanistic and toxicity studies in 3D models.

MERCURIUS™ Spheroid DRUG-seq successfully detected >14,000 genes per sample at ~1.7 million reads and is compatible with Illumina and AVITI sequencers (with broader compatibility upon request).

“MERCURIUS™ Spheroid DRUG-seq follows our strong belief that 3D biology deserves transcriptomic profiling at scale. We can now bring full transcriptome insights into spheroid models without sacrificing throughput or simplicity,” said Riccardo Dainese CEO and Co-founder of Alithea Genomics. “We believe this tool will unlock new layers of transcriptomic discovery in drug screening and toxicology, enabling researchers to explore disease biology in architectures far closer to human tissue.”

Alithea Genomics will be giving live demonstrations of the Spheroid DRUG-seq workflow and will be discussing use cases across 3D drug screening, toxicity assessment, and functional genomics at ASHG (October 14–18 in Boston, USA) and ELRIG (October 21–22 in Liverpool, UK).

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RNA sequencingRNARNA is a nucleic acid that plays a key role in gene expression and protein synthesis. It serves as a messenger between DNA and ribosomes, carrying genetic instructions to produce proteins. Advances in RNA-based therapies, such as mRNA vaccines and gene editing, have revolutionized treatment strategies for genetic disorders and infectious diseases. Explore RNA research tools and therapies in our peer-reviewed product directory; compare products, check customer reviews, and get pricing directly from manufacturers.SpheroidsSpheroids are clusters of cells that have been grown in 3D culture to be used as <i>in vitro</i> model systems. These 3D microtissues can be used for toxicology testing, DMPK studies and many other applications involving cell analysis.ToxicityToxicity is defined as the degree to which a substance can harm humans or animals. It is essential to study the toxicity of pharmaceutical products during the development process so that optimum dosage can be established for the administration of the drug.TranscriptomicsELRIG
Alithea Genomics introduces extraction-free, RNA-seq for 3D drug screening and toxicology